1.  RNA-Seq Differential Gene Expression Analysis

Description

I provide RNA-Seq data analysis to identify differentially expressed genes and biological pathways from transcriptomic datasets. This service helps researchers interpret gene expression patterns and generate publication-ready results.

Services Included

• RNA-Seq count data normalization

• Differential gene expression analysis (DESeq2 / edgeR)

• Identification of significantly regulated genes

• Visualization using heatmaps, volcano plots, and PCA plots

• Functional enrichment analysis (GO and KEGG pathways)

Deliverables

• Differential expression result tables

• Publication-quality figures

• Functional enrichment reports

• Interpreted biological insights

2.  Functional Enrichment and Pathway Analysis

Description

I offer functional enrichment analysis to identify biological functions and pathways associated with gene or protein datasets. This service helps researchers understand the biological significance of their experimental results.

Services Included

• Gene Ontology (GO) enrichment analysis

• KEGG pathway analysis

• Functional annotation interpretation

• Visualization of enriched pathways

Deliverables

• Enriched GO terms and pathways

• Pathway visualization plots

• Summary report for research interpretation

3. Phylogenetic Analysis from Sequence Data

Description

I provide phylogenetic analysis to study evolutionary relationships among genes, proteins, or microbial strains using sequence data.

Services Included

• Multiple sequence alignment (MAFFT / MUSCLE)

• Phylogenetic tree construction

• Tree visualization and annotation

• Evolutionary interpretation

Deliverables

• Phylogenetic tree files

• Publication-ready tree figures

• Summary of evolutionary relationships

4. Bioinformatics Data Visualization for Publications

Description

I help researchers transform complex biological datasets into clear and publication-ready figures suitable for manuscripts, presentations, and reports.

Services Included

• Heatmaps and clustering plots

• PCA and gene expression visualization

• Venn diagrams for comparative studies

• Circos plots for genomic visualization

• Custom graphs for omics data

Deliverables

• High-quality publication-ready figures

• Editable plot files

• Visualization scripts if required

5. NGS Data Quality Control and Preprocessing

Description

I provide quality control and preprocessing of next-generation sequencing (NGS) datasets to ensure high-quality data for downstream bioinformatics analysis.

Services Included

• Raw read quality assessment (FastQC)

• Adapter trimming and filtering

• Removal of low-quality reads

• Generation of quality reports

Deliverables

• Cleaned sequencing datasets

• Quality control reports

• Summary of preprocessing steps